COFIMA

Coordinate and constraint file manipulation

COFIMA (© by Peter Güntert) is a versatile program for interactive manipulations on Cartesian coordinate, distance constraint and dihedral angle constraint files.

With COFIMA you can easily:

• Convert between different data file formats
• Rename atoms, residues and dihedral angles
• Delete atoms, distance or angle constraints
• List specific atoms, distance or angle constraints
• Measure distances and dihedral angles
• Attach atoms (e.g. hydrogens)
• Insert pseudo atoms or pseudo atom constraints
• Generate covalent connectivities
• Sort atoms, distance or angle constraints

Availability

• COFIMA is available free-of-charge. The current version is COFIMA 2.1.
• Manual (PDF)